P.M. Mira, J.C. Meza, A. Nandipati, and M. Barlow, Molecular Biology and Evolution (2015). doi: 10.1093/molbev/msv146.
Read MoreResearch: Publications
Rational Design of Antibiotic Treatment Plans: A Treatment Plan for Managing Evolution and Reversing Resistance→
/P.M. Mira, K. Crona, D. Greene, J.C. Meza, B. Sturmfels, and M. Barlow, PLoS ONE, 10(5) (2015). doi:10.1371/journal.pone.0122283.
Read MoreRational Design of Antibiotic Treatment Plans→
/P.M. Mira, K. Crona, D. Greene, J.C. Meza, and B. Sturmfels, arXiv:1406.1564 (2014).
Read MoreFast Solution of Load Shedding Problems via a Sequence of Linear Programs→
/H.S. Bhat, G.J. Vaz, and J.C. Meza, 2013 IEEE International Conference on Big Data, 1-6, (2013).
Read MoreMinimizing the Kohn-Sham Total Energy for Periodic Systems→
/C. Yang and J.C. Meza, Linear Algebra and its Applications 436 (8), 2764-2779 (2012).
Read MoreAlgorithms and Tools for High-Throughput Geometry-Based Analysis of Crystalline Porous Materials→
/T.F. Willems, C.H. Rycroft, M. Kazi, J.C. Meza, and M. Haranczyk, Microporous and Mesoporous Materials, 149, 1 (2012).
Read MoreSYNAPPS: Data-Driven Analysis for Supernova Spectroscopy→
/R.C. Thomas, P.E. Nugent, and J.C. Meza, Publications of the Astronomical Society of the Pacific, 123(900), 237-248 (2011), The University of Chicago Press. doi:10.1086/658673.
Read MoreDimension Reduction Using Rule Ensemble Machine Learning Methods: A Numerical Study of Three Ensemble Methods→
/O. DeMasi, J. Meza, and D.H. Bailey, arXiv:1108.6094 (2011).
Read MoreSelInv—An Algorithm for Selected Inversion of a Sparse Symmetric Matrix→
/L. Lin, C. Yang, J.C. Meza, J. Lu, L. Ying, and E.W. Weinan, ACM Transactions on Mathematical Software, 37, 4 (2011).
Read MoreSteepest Descent→
/J.C. Meza, Wiley Interdisciplinary Reviews: Computational Statistics (2011). doi: 10.1002/wics.117.
Read MoreOptimization Strategies for the Vulnerability Analysis of the Electric Power Grid→
/A. Pinar, J. Meza, V. Donde, and B. Lesieutre, SIAM Journal on Optimization, Vol. 20, No. 4, 1786-1810 (2010).
Read MoreNewton's Method (PDF)→
/J.C. Meza, Lawrence Berkeley National Laboratory Technical Report, LBNL-3311E (2010).
Read MoreSteepest Descent (PDF)→
/J.C. Meza, Lawrence Berkeley National Laboratory (February 2010).
Read MoreTuning an Electronic Structure Code→
/D.H. Bailey, L.W. Wang, Z. Zhao, J. Meza, E. Strohmaier, and B. Lee, in Performance Tuning of Scientific Applications, D.H. Bailey, R. Lucas, and S. Williams (Eds.) (2010).
Read MoreA Numerical Comparison of Rule Ensemble Methods and Support Vector Machines (PDF)→
/J.C. Meza and M. Woods, Lawrence Berkeley National Laboratory Technical Report, LBNL-2971E (2009).
Read MoreSolving a Class of Nonlinear Eigenvalue Problems by Newton's Method (PDF)→
/W. Gao, C. Yang, and J.C. Meza, Lawrence Berkeley National Laboratory Technical Report, LBNL-2187E (2009).
Read MoreThe Linearly Scaling 3D Fragment Method for Large Scale Electronic Structure Calculations (PDF)→
/Z. Zhao, J.C. Meza, B. Lee, H. Shan, E. Strohmaier, D. Bailey, and L.-W. Wang, Journal of Physics: Conference Series, LBNL-2162E (June 2009).
Read MoreKSSOLV - a MATLAB Toolbox for Solving the Kohn-Sham Equations (PDF)→
/C. Yang, J.C. Meza, B. Lee, and L.-W. Wang, ACM Transactions on Mathematical Software, Vol. 36, 1-35 (2009).
Read MoreMathematical and Statistical Opportunities in Cyber Security (PDF)→
/J.C. Meza, S. Campbell, and D. Bailey, Lawrence Berkeley National Laboratory Technical Report, LBNL-1667E (2009).
Read MoreOptimization Strategies for the Vulnerability Analysis of the Electric Power Grid (PDF)→
/A. Pinar, J. Meza, V. Donde, and B. Lesieutre, SIAM Journal on Optimization, Vol. 20, No. 4, 1786-1810, LBNL-63473 (2009).
Read More