P.M. Mira, J.C. Meza, A. Nandipati, and M. Barlow, Molecular Biology and Evolution (2015). doi: 10.1093/molbev/msv146.
Read MoreResearch: Publications
Rational Design of Antibiotic Treatment Plans: A Treatment Plan for Managing Evolution and Reversing Resistance→
/P.M. Mira, K. Crona, D. Greene, J.C. Meza, B. Sturmfels, and M. Barlow, PLoS ONE, 10(5) (2015). doi:10.1371/journal.pone.0122283.
Read MoreRational Design of Antibiotic Treatment Plans→
/P.M. Mira, K. Crona, D. Greene, J.C. Meza, and B. Sturmfels, arXiv:1406.1564 (2014).
Read MoreMinimizing the Kohn-Sham Total Energy for Periodic Systems→
/C. Yang and J.C. Meza, Linear Algebra and its Applications 436 (8), 2764-2779 (2012).
Read MoreAlgorithms and Tools for High-Throughput Geometry-Based Analysis of Crystalline Porous Materials→
/T.F. Willems, C.H. Rycroft, M. Kazi, J.C. Meza, and M. Haranczyk, Microporous and Mesoporous Materials, 149, 1 (2012).
Read MoreDimension Reduction Using Rule Ensemble Machine Learning Methods: A Numerical Study of Three Ensemble Methods→
/O. DeMasi, J. Meza, and D.H. Bailey, arXiv:1108.6094 (2011).
Read MoreSelInv—An Algorithm for Selected Inversion of a Sparse Symmetric Matrix→
/L. Lin, C. Yang, J.C. Meza, J. Lu, L. Ying, and E.W. Weinan, ACM Transactions on Mathematical Software, 37, 4 (2011).
Read MoreSteepest Descent→
/J.C. Meza, Wiley Interdisciplinary Reviews: Computational Statistics (2011). doi: 10.1002/wics.117.
Read MoreOptimization Strategies for the Vulnerability Analysis of the Electric Power Grid→
/A. Pinar, J. Meza, V. Donde, and B. Lesieutre, SIAM Journal on Optimization, Vol. 20, No. 4, 1786-1810 (2010).
Read MoreThe Linearly Scaling 3D Fragment Method for Large Scale Electronic Structure Calculations (PDF)→
/Z. Zhao, J.C. Meza, B. Lee, H. Shan, E. Strohmaier, D. Bailey, and L.-W. Wang, Journal of Physics: Conference Series, LBNL-2162E (June 2009).
Read MoreOptimization Strategies for the Vulnerability Analysis of the Electric Power Grid (PDF)→
/A. Pinar, J. Meza, V. Donde, and B. Lesieutre, SIAM Journal on Optimization, Vol. 20, No. 4, 1786-1810, LBNL-63473 (2009).
Read MoreSevere Multiple Contingency Screening in Electric Power Systems (PDF)→
/V.Donde, V. Lopez, B. Lesieutre, A. Pinar, C. Yang, and J. Meza, IEEE Transactions on Power Systems, Vol. 23, No . 2, 406-417 (2008).
Read MoreLinear-Scaling Three-Dimensional Fragment Methods for Large-Scale Electronic Structure Calculations (PDF)→
/L.W. Wang, Z. Zhao, and J.C. Meza, Physical Review B. 77, 165113 (April 2008), Proceedings of SC08 (November 2008), LBNL-959E.
* Recipient of the 2008 ACM Gordon Bell Prize in the "Special" category for "algorithmic innovation"
A Divide-and-Conquer Linear Scaling Three-Dimensional Fragment Method for Large Scale Electronic Structure Calculations (PDF)→
/Z. Zhao, J. Meza, and L.W. Wang, Journal of Physics: Condensed Matter 20 294203 (8pp), No. 29 (2008). doi:10.1088/0953-8984/20/29/294203.
Read MoreSevere Multiple Contingency Screening in Electric Power Systems (PDF)→
/V. Donde, V. Lopez, B. Lesieutre, A. Pinar, C. Yang, and J. Meza, IEEE Transactions on Power Systems, Vol. 23, No. 2, 406-417 (2008). doi:10.1109/TPWRS.2008.919243.
Read MoreA New Linear Scaling Electronic Structure Calculation Method for Nanoscience Simulations (PDF)→
/L.W. Wang, Z. Zhao, and J.C. Meza, submitted to Physical Review Letters, LBNL-63252 (2007).
Read MoreOPT++: An Object-Oriented Toolkit for Nonlinear Optimization→
/J. Meza, R. Oliva, P. Hough, and P. Williams, ACM Transactions on Mathematical Software, Vol. 33, No. 2 (2007).
Read MoreIdentification of Severe Multiple Contingencies in Electric Power Systems (PDF)→
/V. Donde, V. Lopez, B. Lesieutre, A. Pinar, C. Yang, and J. Meza, LBNL-60511 (2006).
Read MoreLinear Scaling 3D Fragment Method for Large-Scale Electronic Structure Calculations (PDF)→
/L.W. Wang, Z. Zhao, and J.C. Meza, LBNL-61691 (October 2006).
Read MoreA Constrained Optimization Algorithm for Total Energy Minimization in Electronic Structure Calculation→
/C. Yang, J.C. Meza, and L.-W. Wang, Journal of Computational Physics, 217, 709-721 (2006).
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